IGVFFI4000XZMR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6737HSKU(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP030_G7_P078_L007_R2

md5sum

6d1118d5e9df1e3c753e23a9d8f224ae

Content MD5sum

d2e6e24eb2caf0823abebbc22425fbb1

File Size

12 GB

Submitted File Name

Multiome_RNA_RP030_G7_L007_P078_S79_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

180172685

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5420ZYPI

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 6 more samples