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INDEXED
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SequenceFile
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IGVFFI3994KWTJ
IGVFFI3994KWTJ
released
validated
Json view
File Set
IGVFDS5042GGCM
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P015-R2
md5sum
faca3eb132352fd270598f7deb061197
Content MD5sum
c169ce6a86d54d4c0c5e7f8c8c575f51
File Size
8.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool15.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
52464895
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2664SVPC
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.5 GB
validated
IGVFFI3281LZFI
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.2 GB
validated