IGVFFI3985PIUV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1447ZIXP(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP012_G2_P060_L008_R1

md5sum

cef45a18121e5f06cd2e22a3f9820415

Content MD5sum

59b70700281a7c2c5b7e133df55e0a01

File Size

1.9 GB

Submitted File Name

Multiome_RNA_RP012_G2_L002_P060_S34_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

95386061

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3226MLFV

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) substantia nigra tissue; ... and 14 more samples