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IGVFFI3980HFTD

released
validated
File Set
IGVFDS5969XSBI(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
43b292cab9d1fe333e6d3397b32bc8c1
Content MD5sum
f5a11a9b7bcec79b384173049ff673e2
File Size
14 GB
Submitted File Name
igvf_010/nova1/igvf_010_B16_D_nova_N1_L001_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
H7TLWDSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
197302515

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI3980HFTD, IGVFFI5862IXNW
Ali Mortazavi, UCI
1.4 KB
validated