Home

IGVFFI3976MXAC

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7972QGPM(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 285
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX2-SC2_snATAC_S1_R3
md5sum
0623fcb7b22dacd987a92a20b78c797e
Content MD5sum
3eef2436462d0bd34e80d4c8b71b105b
File Size
5.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX2-SC2/AHM2T2DSX2/XHLT1-POOL-XX2-SC2-ATAC_S6_L004_R3_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
285
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
50
Read Count
178742587

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 54.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF