IGVFFI3972KFZF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6955FGRJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP033_G4_P080_L008_I1

md5sum

f787833269794a9069dd182edf24c112

Content MD5sum

5ebb4a553409540279b283482eec83a4

File Size

1.1 GB

Submitted File Name

Multiome_RNA_RP033_G4_L004_P080_S56_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19NHCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

148129410

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3471ECAX

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples