IGVFFI3967QNUQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9661AXWU(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_X004_G1_P003_L004_R2

md5sum

d9651143945fc3d85fbcd9aa1633e420

Content MD5sum

d219f9932cce86f356cfd61a8ce748d4

File Size

3.4 GB

Submitted File Name

Multiome_ATAC_PD_16-14_CING_X004_S01_L001_B1_T1_P003_S15_L004_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5TH7DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

195993543

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7491SDBL

Tissue

posterior cingulate gyrus

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment