Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI3960PNJX
IGVFFI3960PNJX
released
validated
Json view
File Set
IGVFDS4869FXYY
(untransfected prime editing Variant-EFFECTS)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:230423pPPIFEnformer-Jurkat-Amp_PPIF_promoter-Jurkat-PE2_Exp2_NegControl-PCRrep1_I2
md5sum
2e4abc90f9de7edcbb1df17ef8bea516
Content MD5sum
bcabf4f1a492eb603d85f48ae5131b92
File Size
1.8 MB
Submitted File Name
230423pPPIFEnformerJurkat-Jurkat-PE-NA-Amp-pPPIF-BioRep1-FFRep1_BinNeg-PCRrep1_S401_I2_001.fastq.gz
Sequencing Details
Sequencing Platform
Illumina NextSeq 550
Sequencing Run
1
Illumina Read Type
I2
Index
GTCTGATG:TTGT
Average Read Length
4
Read Count
217356
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3422KXGR
InVitroSystem
Jurkat
Jurkat cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)
Attribution
Award
HG011972
Principal Investigator(s)
Anshul Kundaje
,
Jesse Engreitz
,
Marlene Rabinovitch
,
Lars Steinmetz
,
Michael Bassik
,
Thomas Quertermous
,
Will Greenleaf
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford