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IGVFFI3952NJOF

released
validated
File Set
IGVFDS7919DUHD(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1688
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1688_R1
buenrostro-bernstein:SS-LS_1688_R1
md5sum
d660c6120fa784f91c9bfee1e917df4c
Content MD5sum
89f870a0eae4f585c1fe1f7baf00fe7e
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1089_L4_SS-PKR-3_SS-V1-1st-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1688
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
67241950

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (26 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad