IGVFFI3937RSMI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3071BBZO(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G2_P062_L008_R1

md5sum

a155097d585ebffbae70f5de6ab71347

Content MD5sum

5dc58dfd81b32c53acac4f7e48dbd650

File Size

864 MB

Submitted File Name

Multiome_RNA_RP014_G2_L002_P062_S30_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

44770487

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7335HESV

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples