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IGVFFI3937KXBX

released
validated
File Set
IGVFDS1560LMQZ(scATAC-seq)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jay-shendure:scATAC_mEBs_rep1_day21_10XlaneA_I2
md5sum
2dcf5ba41e120e9f131c021c671fe218
Content MD5sum
408304d8cc2fc4e51b094395513a993b
File Size
1.8 GB
Submitted File Name
/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/scATAC_mEBs/scATAC_mEBs_d21_crispri_rep1_lane_a_I2_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
1
Flowcell ID
H3JK7BGXG
Lane
1
Sequencing Kit
NextSeq 500/550 High-Output v2.5 Kit
Illumina Read Type
I2
Average Read Length
16
Read Count
101261224

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
mouse embryonic stem differentiated cell specimen induced to embryoid body for 21 days (cellular sub pool: 10XlaneA), male, Mus musculus WD44

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jay Shendure, UW
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8994UMQU, IGVFFI3937KXBX, IGVFFI4010FPRN, IGVFFI4853BUVD
Jay Shendure, UW
856 B
validated

Attribution

Award
HG011966
Principal Investigator(s)
Contact P.I.
Jay Shendure
Lab
Jay Shendure, UW