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INDEXED
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SequenceFile
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IGVFFI3934VSKO
IGVFFI3934VSKO
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7334
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7334_R1
md5sum
4e25f03def554a8b6877c0ec4c95c918
Content MD5sum
60e7ac528caca28d657df5c97d1322dc
File Size
8.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1911_L5_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7334
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
219168174
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9001SPLR
yaml
seqspec
seqspec of IGVFFI3934VSKO, IGVFFI9203FDKY
Jason Buenrostro, Broad
1.3 KB
validated