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INDEXING 1.5K
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SequenceFile
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IGVFFI3920VHRX
IGVFFI3920VHRX
released
validated
Json view
File Set
IGVFDS5841CMLA
(single-cell RNA sequencing assay (SHARE-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS04-prim3-RNA.barcode.fastq.gz
md5sum
4b4454ff4a204b56f5caee0e0bdbab94
Content MD5sum
339db8ebf01fc3f4d58d8eadb938f27b
File Size
2.9 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/DSS04-prim3-RNA.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
132617292
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0332KRWE
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4296ZJRS
yaml
seqspec
seqspec of IGVFFI9904OBDT, IGVFFI1895BUYA, IGVFFI3920VHRX
Jason Buenrostro, Broad
1.2 KB
validated