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INDEXED
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SequenceFile
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IGVFFI3918HKXF
IGVFFI3918HKXF
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6624LIQT
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 154
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX13-SC1_snATAC_S1_R1
md5sum
33396e061a2b8301847995c9e3ff259c
Content MD5sum
e85c3da7b9a933cf97b25b519f5a80ca
File Size
5.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX13-SC1/AHFFGGDSX2/XHLT1-POOL-XX13-SC1-ATAC_S15_L002_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
154
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
158843593
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9333JIPE
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 55.0 years) peripheral blood mononuclear cell; ... and 18 more samples