IGVFFI3917BBUL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1275ATQY(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G2_P056_L003_R2

md5sum

56a82e4693e61ba8f5742331a6b4a7ed

Content MD5sum

c7a90aa82d57a7e9eb9dd66117f146de

File Size

2.5 GB

Submitted File Name

Multiome_RNA_RP007_G2_L002_P056_S30_L003_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

60778250

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4037ZUPB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples