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INDEXED
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SequenceFile
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IGVFFI3897TQJB
IGVFFI3897TQJB
released
validated
Json view
File Set
IGVFDS9931JAJO
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8320
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8320_R1
md5sum
f0ca8efcbc72d3411eaa5345ce194980
Content MD5sum
c3fddaef01e1f33d36ad290a21475578
File Size
1.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2166_L1_SS-PKR-584_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8320
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
31024175
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1865KZPO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0456AGBL
yaml
seqspec
seqspec of IGVFFI3897TQJB, IGVFFI0471SKPU
Jason Buenrostro, Broad
1.3 KB
validated