IGVFFI3837QSMP

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3998OHPZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G6_P062_L007_I1

md5sum

43e531b6fdb5d3a9b93af4ca99bf8862

Content MD5sum

1f57455ce941769356d160b4a1d81126

File Size

308 MB

Submitted File Name

Multiome_RNA_RP014_G6_L006_P062_S34_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

46429852

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8298LTTJ

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples