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IGVFFI3830KYPB

released
validated
File Set
IGVFDS0858CFYH(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 2299
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2299_R1
buenrostro-bernstein:SS-LS_2299_R1
md5sum
90684a63b5bd65133cfb05f03cc34815
Content MD5sum
43347980ebbf98c417d2f3ddd09df24d
File Size
405 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-63_L1_SS-PKR-6_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2299
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
15444156

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 6), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad