IGVFFI3825DMEM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8825BDYZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G5_P072_L002_R1

md5sum

91e9548fde0efd6e11057911d22b23df

Content MD5sum

c6b73288616d2ee9808618e7f6a6047f

File Size

15 GB

Submitted File Name

Multiome_RNA_X053_G5_L005_P072_S9_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

170078719

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4261OSAU

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples