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INDEXED
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SequenceFile
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IGVFFI3820FJEW
IGVFFI3820FJEW
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 5366
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5366_R2
md5sum
9d53da5ccf0d315afbfe53acf94a61e3
Content MD5sum
e7a5f7b8ea9295428bdcbd2f8c4a0cc3
File Size
11 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1576_L2_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5366
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
166380781
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4509WYHB
yaml
seqspec
seqspec of IGVFFI4472GWMH, IGVFFI3820FJEW
Jason Buenrostro, Broad
1.3 KB
validated