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INDEXED
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SequenceFile
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IGVFFI3818KWOH
IGVFFI3818KWOH
released
validated
Json view
File Set
IGVFDS4938RHAV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8834
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8834_R1
md5sum
5741ddf84768a921d4cad1e6aad67717
Content MD5sum
f33fd08907719bed8afceb2376ce3c96
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2280_L5_SS-PKR-176_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8834
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
23924849
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2637MMKV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0806LFIE
yaml
seqspec
seqspec of IGVFFI3818KWOH, IGVFFI0218GTJZ, IGVFFI4901YPRG
Jason Buenrostro, Broad
1.3 KB
validated