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IGVFFI3817SUML

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3761ALRH(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X034_G2_P033_L001_R1
md5sum
bbb46515fddba74d980221244961a8c7
Content MD5sum
e44e5063eb3ce83a0936c53b073152c6
File Size
12 GB
Submitted File Name
Multiome_ATAC_X034_G2_L002_P033_S12_L001_R1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H2WFTDSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
225456038

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 80 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 10 more samples