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SequenceFile
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IGVFFI3815VSSK
IGVFFI3815VSSK
released
validated
Json view
File Set
IGVFDS2128TDSX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4325
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4325_R1
md5sum
89bbfb486aa2021122798e19e6c9018d
Content MD5sum
441f35f03d15a7c94e1045e148155fcb
File Size
1.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-531_L1_SS-PKR-170_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4325
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
15898380
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8353NHHV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 170)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6006AUMZ
yaml
seqspec
seqspec of IGVFFI3815VSSK, IGVFFI8566RIBQ, IGVFFI4567AAAT
Jason Buenrostro, Broad
1.3 KB
validated