IGVFFI3811KQTP

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7046AXFV(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G2_P052_L001_I1

md5sum

df982d468bec2439872697062ce8bdcd

Content MD5sum

83b51e10b0c7e66df49257847588698d

File Size

438 MB

Submitted File Name

Multiome_RNA_RP002_G2_L002_P052_S10_L001_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

71498180

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2903AXLJ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples