IGVFFI3811FKOC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3659SZDC(gRNA sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

gary-hon:LW424B_6_I2

md5sum

cb58a53f499517978e5f5d4fc4280744

Content MD5sum

063ec9a06f23a920166e79ef295621fe

File Size

939 MB

Submitted File Name

/project/GCRB/Hon_lab/shared/data/sequencing_data/2024/2024-05-01-Novogene-NovaSeq.Hon19_20/sgRNA//LW424B_S4_L006_I2_001.fastq.gz

Checkfiles Version

Legacy version of checkfiles

Sequencing Details

Sequencing Platform

Illumina NovaSeq X Plus

Sequencing Run

Flowcell ID

227C7WLT4

Lane

Sequencing Kit

NovaSeq X Series 25B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

148613396

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM3002CFHI

InVitroSystem

H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW424), female, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library