IGVFFI3795JIOH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7046AXFV(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G2_P052_L003_I2

md5sum

9e2a0f9487c92e398a3ed22a6c5f296d

Content MD5sum

bb50fff0c1a018f2a8641218e42bb2c1

File Size

428 MB

Submitted File Name

Multiome_RNA_RP002_G2_L002_P052_S10_L003_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

78574090

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2903AXLJ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples