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INDEXED
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SequenceFile
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IGVFFI3778YGNQ
IGVFFI3778YGNQ
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6323NFTV
(single-nucleus ATAC-seq (10x multiome))
Summary
I1 reads from sequencing run 199
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX14-SC4_snATAC_S2_I1
md5sum
23aa2c6abbc8791ef40bf3c09cc12edd
Content MD5sum
b995168ff57c6400ca1e74a4ea4abef9
File Size
1.8 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX14-SC4/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX14-SC4-ATAC_S3_L003_I1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
199
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
8
Read Count
253896066
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9745CPOX
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (male, 24.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 52.0 years) peripheral blood mononuclear cell; ... and 18 more samples