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IGVFFI3778LIMT

released
validated
File Set
IGVFDS5447HBUF(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
b49aa80b860b63c28641cd50565d131d
Content MD5sum
f6a3767cb2bc7f3bce03a5e00187dc29
File Size
6.3 GB
Submitted File Name
igvf_004/nova1/igvf_004_B06_D_nova_N1_L001_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HTH33DSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
181280198

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1486BCGL, IGVFFI3778LIMT
Ali Mortazavi, UCI
1.3 KB
validated