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INDEXED
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SequenceFile
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IGVFFI3766OUJU
IGVFFI3766OUJU
released
validated
Json view
File Set
IGVFDS9445YYVB
(Parse SPLiT-seq)
Summary
reads from sequencing run 10
File Format
fastq
Content Type
reads
md5sum
3818c22a8c5eb35a9ed747e7314c70e9
Content MD5sum
3ab4d7ae984cf2b1f13deae7cc1a27d0
File Size
2.9 GB
Submitted File Name
igvf_b01/nanopore/igvfb01_13H_lig-ss_10.fastq.gz
Sequencing Details
Sequencing Platform
ONT GridION X5
Sequencing Run
10
Sequencing Kit
ONT Ligation Sequencing Kit V14
Average Read Length
659
Read Count
4892034
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM2294BOOU
MultiplexedSample
left cerebral cortex
multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples
Files This File Derives From
1 item
Accession
File Set
File Format
Content Type
Lab
File Size
Upload Status
IGVFFI2783NHJJ
IGVFDS9445YYVB
pod5
Nanopore reads
Ali Mortazavi, UCI
46 GB
validated
Attribution
Award
HG012077
Principal Investigator(s)
Lior Pachter
,
Kim Green
,
Grant MacGregor
,
Ali Mortazavi
,
Barbara Wold
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI