Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI3764RHAT
IGVFFI3764RHAT
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6652SASN
(10x multiome with scMito-seq)
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
leif-ludwig:measurement2303522004_scATAC_R3_007
md5sum
c463c8ec5182452d0cf89bf088804d13
Content MD5sum
df8ab7cfe93c0ebf402a1d434e33673f
File Size
2.9 GB
Submitted File Name
/data/cephfs-1/work/groups/ludwig/scratch/IGVF/fastq/A4859/hPBMC_2303522004_Multiome_ATAC_S1_L007_R3_001.fastq.gz
Checkfiles Version
v17
Attribution
Leif Ludwig, MDC
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X Plus
Sequencing Run
1
Flowcell ID
22VLC5LT3
Lane
7
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R3
Average Read Length
101
Read Count
61968463
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9795ZRRT
PrimaryCell
peripheral blood mononuclear cell
Homo sapiens (male, 63 years) peripheral blood mononuclear cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3992MUBU
yaml
seqspec
seqspec of IGVFFI6485XXIE, IGVFFI0044NCHE, IGVFFI3764RHAT
Leif Ludwig, MDC
1.5 KB
validated