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INDEXED
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SequenceFile
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IGVFFI3761PXJP
IGVFFI3761PXJP
released
validated
Json view
File Set
IGVFDS1036WPFQ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8395
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8395_R1
md5sum
c378d63b33bdf3e2b569d3123f0d2d73
Content MD5sum
13386081a31bd4e673bf45b38c073286
File Size
3.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2255_L6_SS-PKR-605_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8395
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
81654479
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1668LOKY
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8263GRNS
yaml
seqspec
seqspec of IGVFFI3761PXJP, IGVFFI5491WVNS
Jason Buenrostro, Broad
1.3 KB
validated