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INDEXED
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SequenceFile
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IGVFFI3752LRVZ
IGVFFI3752LRVZ
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1649BWGA
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 207
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX15-SC1_snATAC_S3_R1
md5sum
23d253548f1c10dc0db100308757f7ef
Content MD5sum
0ea77abb794e5687d3e9a195f8a35459
File Size
7.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX15-SC1/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX15-SC1-ATAC_S4_L004_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
207
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
248899823
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1205PSUM
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples