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IGVFFI3752HTSU

released
validated
File Set
IGVFDS1828CQSR(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1590
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1590_R1
buenrostro-bernstein:SS-LS_1590_R1
md5sum
d40347b1b8a2da22ec8149a13ca8972b
Content MD5sum
7c53e56c77958583e129f3c1d568659e
File Size
1.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1087_L3_SS-PKR-2_SS-V2-PLATE2-3rd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1590
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
66759693

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (37 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad