IGVFFI3729YISF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9648TFEB(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP008_G3_P058_L004_I2

md5sum

eaeaaed2e53be236442d9d69b9eefbd0

Content MD5sum

fa5b3ba27a2de2180a8dc63e7340ae91

File Size

431 MB

Submitted File Name

Multiome_RNA_RP008_G3_L003_P058_S3_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

57996773

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3559TDPL

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 69 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples