IGVFFI3722YSXU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0925GEIE(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP007_G4_P055_L001_R2

md5sum

0b3ef4c4a8f86fb7538ca24e2e30ab8b

Content MD5sum

ca8465af60c2335fd1aad18ff41472b9

File Size

1.2 GB

Submitted File Name

Multiome_ATAC_RP007_G4_L004_P055_S16_L001_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JGVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

67445693

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2267IQVP

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples