IGVFFI3719DOCH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7801WHYT(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G1_P012_L004_R2

md5sum

4e569c558c15542c2dd2a28c930042b9

Content MD5sum

0fa3aa180357305519c3cbcd0121f695

File Size

18 GB

Submitted File Name

Multiome_RNA_X014_G1_L001_P012_S27_L004_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

401331831

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3402LHVF

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples