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INDEXED
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SequenceFile
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IGVFFI3713SEQP
IGVFFI3713SEQP
released
validated
Json view
File Set
IGVFDS4429VWLZ
(snM3C-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C39_day12_L3_R2
md5sum
3e57c47b17b55e50b57218aed6b8ec9e
Content MD5sum
522b1052e695537328b9888da7dc98a1
File Size
3.2 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C39D12-Pos1-C11_S32_L003_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
148.75
Read Count
45464854
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3009NMJU
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA