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IGVFFI3705PWOQ

released
validated
File Set
IGVFDS6417ZIEI(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS04-prim-ATAC.R1.fastq.gz
md5sum
f81a176145363d52b91fd687206c4fbc
Content MD5sum
6471c305a27df59ba77c9b7a1cb8b9d3
File Size
502 MB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS04-prim-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS04-prim-5k_P1.62
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
49.52
Read Count
15394803

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7960YELB, IGVFFI9338UHLG, IGVFFI3705PWOQ
Jason Buenrostro, Broad
1.2 KB
validated