Home

IGVFFI3705NYNY

released
validated
File Set
IGVFDS7814BDIB(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 8
File Format
fastq
Content Type
reads
md5sum
955815f212e9389c30883d501e60d345
Content MD5sum
a338d7c5183fc35ce16c0995b6d3e9b2
File Size
9.3 GB
Submitted File Name
igvf_004/nova2/igvf_004_B15_D_nova_N2_L004_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
8
Flowcell ID
HTGM5DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
127147655

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.4 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI2841ZARO, IGVFFI3705NYNY
Ali Mortazavi, UCI
1.4 KB
validated