IGVFFI3690FLUP

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1855NJXL(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP031_G6_P080_L006_R2

md5sum

bf505f2902d1de58a1c44f05d4d61d0c

Content MD5sum

5f97d98ac934dbf411149e7b365805b2

File Size

9.3 GB

Submitted File Name

Multiome_RNA_RP031_G6_L006_P080_S42_L006_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19NHCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

137937283

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5709CORH

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; Homo sapiens (male, 70 years) putamen tissue associated with Parkinson's disease; ... and 6 more samples