IGVFFI3688WTIX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8839RSIR(cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)

Summary

I1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

gary-hon:LW272C_1_I1

md5sum

a9b067f1afed4cdf8e6e58844c323e23

Content MD5sum

e15c1a91a26ef418dbfbd8a1e95aa5cd

File Size

355 MB

Submitted File Name

/project/GCRB/Hon_lab/shared/data/sequencing_data/2023/2023-12-22-McDermott-NextSeq.10X/2023-12-22/outs/fastq_path/AAF5CKNM5//LW272C_S6_L001_I1_001.fastq.gz

Checkfiles Version

Legacy version of checkfiles

Sequencing Details

Sequencing Platform

Illumina NextSeq 2000

Sequencing Run

Flowcell ID

AAF5CKNM5

Lane

Illumina Read Type

Average Read Length

Read Count

51434877

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM1608DJBB

InVitroSystem

H9 differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW272), female, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library