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INDEXED
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SequenceFile
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IGVFFI3686XNQQ
IGVFFI3686XNQQ
released
validated
Json view
File Set
IGVFDS2234GUSK
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4307
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4307_R1
md5sum
69be442786c8f80952a71e4f8a494727
Content MD5sum
827467dd2e6d6f8d17d6120212c3a0f9
File Size
5.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-582_L3_SS-PKR-199_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4307
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
78369771
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8255TRGO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7481UBJL
yaml
seqspec
seqspec of IGVFFI3686XNQQ, IGVFFI9461UTOF, IGVFFI0602VAOM
Jason Buenrostro, Broad
1.3 KB
validated