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INDEXED
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SequenceFile
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IGVFFI3657WURS
IGVFFI3657WURS
released
validated
Json view
File Set
IGVFDS9567UTEC
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
ae28f71dfb7dd8b1050fd983af091b37
Content MD5sum
f30362e9f0ef274166a58060fec21148
File Size
7.7 GB
Submitted File Name
igvf_009/nova1/igvf_009_B16_D_nova_N1_L002_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
H5VJ5DSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
223404013
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9954PZQC
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9745TMUG
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
789 MB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0680BLRA
yaml
seqspec
seqspec of IGVFFI1890QBFD, IGVFFI3657WURS
Ali Mortazavi, UCI
1.4 KB
validated