IGVFFI3650VYMP

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8382VPXR(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G6_P056_L003_I1

md5sum

3c3b67c5fdeb43e8bf24762a54105976

Content MD5sum

9c8dcae79bbf7904ef2ce269c319cb2f

File Size

476 MB

Submitted File Name

Multiome_RNA_RP005_G6_L006_P056_S18_L003_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

79604529

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8050BLFH

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples