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INDEXED
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SequenceFile
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IGVFFI3640FQLT
IGVFFI3640FQLT
released
validated
Json view
File Set
IGVFDS7535KDYJ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8313
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8313_R1
md5sum
e7608f81ac4bf8187217bc2ed45d6c13
Content MD5sum
7dc9abf99b5a20d011a0fce91e7a3ad0
File Size
7.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2159_L1_SS-PKR-574_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8313
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
187848746
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5455KAQH
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 574)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8889RNMR
yaml
seqspec
seqspec of IGVFFI3640FQLT, IGVFFI5704OFGZ
Jason Buenrostro, Broad
1.3 KB
validated