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INDEXED
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SequenceFile
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IGVFFI3637IMBD
IGVFFI3637IMBD
released
validated
Json view
File Set
IGVFDS4124BSHW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4017
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4017_R1
md5sum
72c2cce5b9a3e3b2f819f140b0df1f5d
Content MD5sum
c7e287fe495049d762ce709e0e6db4ef
File Size
531 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-741_L1_SS-PKR-205_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4017
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
9270973
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1100PPNI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7699NDUX
yaml
seqspec
seqspec of IGVFFI3637IMBD, IGVFFI4851RGLV, IGVFFI3249RQAN
Jason Buenrostro, Broad
1.3 KB
validated