Home

IGVFFI3631IVCC

released
validated
File Set
IGVFDS0005ORLJ(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
7ee86e7d89d40e411a67c2f5ed16056f
Content MD5sum
84addf58f7bd27be14c23916794392c8
File Size
14 GB
Submitted File Name
igvf_003/nova1/igvf_003_B13_D_nova_N1_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
HKMGCDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
183696023

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; Mus musculus 129S1J (male, 72 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI3631IVCC, IGVFFI0134BWIU
Ali Mortazavi, UCI
1.4 KB
validated