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INDEXED
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SequenceFile
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IGVFFI3629HYYQ
IGVFFI3629HYYQ
released
validated
Json view
File Set
IGVFDS3227QLAU
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P011-R1
md5sum
b17171ff75497c11b27e320dd555f447
Content MD5sum
8f689d2db5027171597f77c7d3e41f4b
File Size
8.2 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool11.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
56937739
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4472HHUS
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
8.6 GB
validated
IGVFFI8123BIZD
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
8.3 GB
validated