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INDEXED
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SequenceFile
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IGVFFI3625EMNB
IGVFFI3625EMNB
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5151PSMX
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X004_G4_P003_L004_R1
md5sum
f4951f83373299827fc9623436f5e0b1
Content MD5sum
10759c08ac83ba302562670c23b290b3
File Size
6.4 GB
Submitted File Name
Multiome_ATAC_nd_13-49_CBL_X004_S04_L004_B1_T1_P003_S18_L004_R1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5TH7DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
203022732
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8408MAMT
Tissue
cerebellar cortex
Homo sapiens (female, 75 years) cerebellar cortex tissue