Home

IGVFFI3577OMBM

released
validated
File Set
IGVFDS6835GFNB(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
81554a419906ef6ebf4b30d60a74f8b0
Content MD5sum
55faccba448aec7928ae4e640bfccfe2
File Size
11 GB
Submitted File Name
igvf_005/nova2/igvf_005_B13_D_nova_N2_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7
Flowcell ID
HVYNYDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
152496309

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.4 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI3577OMBM, IGVFFI6921TGAX
Ali Mortazavi, UCI
1.4 KB
validated